PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma3g01570.1
Common NameZOSMA_3G01570
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 212aa    MW: 24054.1 Da    PI: 8.4591
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma3g01570.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.22.2e-06755254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +  ++ rE++ Rd++N+ f +L + l       ++ +sKa+iL  A++ +++L
  Zosma3g01570.1  7 KIHKSHREKQKRDHLNEVFLKLERTLEDV----KQNNSKASILNDATKILRDL 55
                    567899*********************97....699************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.5E-8475IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.357555IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-11683IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.60E-4655No hitNo description
PfamPF000101.4E-4755IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MTEITKKIHK SHREKQKRDH LNEVFLKLER TLEDVKQNNS KASILNDATK ILRDLIVQVE  60
SLRKENANLI TETQYVTTER DELKDEVSTL WTELDKLKNE LSQMGHVDPS WYNVTNKAAS  120
LVPVDNSIES HSYLGLRIKT SVLNPPYVTR PHARYPNSLD SRPQRPLFQH MIATIGPQSS  180
NSSTSTTICN NSTTGSREME GSSSPRELQL L*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9P3X11e-155A0A0K9P3X1_Z
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24813884
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.38e-32bHLH family protein